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Publications

No evidence of difference in mortality with amoxicillin versus co-amoxiclav for hospital treatment of community-acquired pneumonia

Wei J. et al, (2024), Journal of Infection

SARS-CoV-2, influenza A/B and respiratory syncytial virus positivity and association with influenza-like illness and self-reported symptoms, over the 2022/23 winter season in the UK: a longitudinal surveillance cohort.

Dietz E. et al, (2024), BMC Med, 22

Target enrichment improves culture-independent detection of Neisseria gonorrhoeae and antimicrobial resistance determinants direct from clinical samples with Nanopore sequencing.

Street TL. et al, (2024), Microb Genom, 10

Risk of SARS-CoV-2 reinfection during multiple Omicron variant waves in the UK general population.

Wei J. et al, (2024), Nature communications, 15

System-wide approaches to antimicrobial therapy and antimicrobial resistance in the UK: the AMR-X framework.

AMR-X Collaborators None., (2024), The Lancet. Microbe

Genomic epidemiology of Candida auris introduction and outbreaks in the United Kingdom

Kappel D. et al, (2024)

Target enrichment improves culture-independent detection ofNeisseria gonorrhoeaedirect from sample with Nanopore sequencing

Street TL. et al, (2024)

The burden of bacterial antimicrobial resistance in the WHO African region in 2019: a cross-country systematic analysis

ROBLES AGUILAR G., (2023), The Lancet Global Health

Deep Reinforcement Learning for Multi-class Imbalanced Training: Applications in Healthcare

YANG J. et al, (2023), Machine Learning

Interpretable machine learning-based decision support for prediction of antibiotic resistance for complicated urinary tract infections

YANG J. et al, (2023), npj Antimicrobials and Resistance

Persistence of SARS-CoV-2 antibodies over 18 months following infection: UK Biobank COVID-19 Serology Study.

Bešević J. et al, (2023), Journal of epidemiology and community health

The epidemiology of multidrug-resistant organisms in persons diagnosed with cancer in Norway, 2008-2018: expanding surveillance using existing laboratory and register data.

Danielsen AS. et al, (2023), European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology

A scalable federated learning solution for emergency care using low cost microcomputing: Privacy-preserving development and evaluation of a COVID-19 screening test in UK hospitals

Soltan A. et al, (2023), The Lancet. Digital Health

The burden and dynamics of hospital-acquired SARS-CoV-2 in England.

Cooper BS. et al, (2023), Nature

Evaluation of sequence hybridization for respiratory viruses using the Twist Bioscience Respiratory Virus Research panel and the OneCodex Respiratory Virus sequence analysis workflow.

Kapel N. et al, (2023), Microbial genomics, 9

The burden of antimicrobial resistance in the Americas in 2019: a cross-country systematic analysis.

Antimicrobial Resistance Collaborators None., (2023), Lancet regional health. Americas, 25

Algorithmic fairness and bias mitigation for clinical machine learning with deep reinforcement learning

Yang J. et al, (2023), Nature Machine Intelligence

Integrating at-scale health data into doctoral training (Preprint)

Nichols TE. et al, (2023)

Scalable federated learning for emergency care using low cost microcomputing: Real-world, privacy preserving development and evaluation of a COVID-19 screening test in UK hospitals

Soltan AAS. et al, (2023)

Protection against SARS-CoV-2 Omicron BA.4/5 variant following booster vaccination or breakthrough infection in the UK.

Wei J. et al, (2023), Nature communications, 14

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