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Publications

Metagenomic sequencing as a clinical diagnostic tool for infectious diseases: a systematic review and meta-analysis

Govender K. et al, (2020)

RNA polymerase mutations cause cephalosporin resistance in clinical Neisseria gonorrhoeae isolates.

Palace SG. et al, (2020), eLife, 9

Genomic diversity affects the accuracy of bacterial single-nucleotide polymorphism-calling pipelines.

Bush SJ. et al, (2020), GigaScience, 9

Risk factors for Klebsiella pneumoniae carbapenemase (KPC) gene acquisition and clinical outcomes across multiple bacterial species

Mathers A. et al, (2020), Journal of Hospital Infection

Equations to predict antimicrobial minimum inhibitory concentrations in Neisseria gonorrhoeae using molecular antimicrobial resistance determinants

Demczuk W. et al, (2019), Antimicrobial Agents and Chemotherapy

Optimizing DNA extraction methods for Nanopore sequencing of Neisseria gonorrhoeae direct from urine samples

Street TL. et al, (2019), Journal of Clinical Microbiology

Hash-based core genome multi-locus sequencing typing for Clostridium difficile

EYRE D. et al, (2019), Journal of Clinical Microbiology

Ethnically diverse urban transmission networks of Neisseria gonorrhoeae without evidence of HIV serosorting

Dave J. et al, (2019), Sexually Transmitted Infections

Impact of intended and relative dose intensity of R-CHOP in a large, consecutive cohort of elderly diffuse large B-cell lymphoma patients treated with curative intent: no difference in cumulative incidence of relapse comparing patients by age.

Eyre TA. et al, (2019), Journal of internal medicine, 285, 681 - 692

Genomic diversity affects the accuracy of bacterial SNP calling pipelines

Bush S. et al, (2019)

RNA polymerase mutations cause cephalosporin resistance in clinical Neisseria gonorrhoeae isolates

Palace S. et al, (2019)

The global challenge of Candida auris in the intensive care unit.

Cortegiani A. et al, (2019), Critical care (London, England), 23

Carbapenem-resistant Enterobacteriaceae dispersal from sinks is linked to drain position and drainage rates in a laboratory model system.

Aranega-Bou P. et al, (2019), The Journal of hospital infection, 102, 63 - 69

Clostridium difficile trehalose metabolism variants are common and not associated with adverse patient outcomes when variably present in the same lineage.

Eyre DW. et al, (2019), EBioMedicine, 43, 347 - 355

Male gender is an independent predictor for worse survival and relapse in a large, consecutive cohort of elderly DLBCL patients treated with R-CHOP.

Eyre TA. et al, (2019), British journal of haematology

WGS to determine the extent of Clostridioides difficile transmission in a high incidence setting in North Wales in 2015.

Eyre DW. et al, (2019), The Journal of antimicrobial chemotherapy, 74, 1092 - 1100

A Role for Tetracycline Selection in Recent Evolution of Agriculture-Associated Clostridium difficile PCR Ribotype 078.

Dingle KE. et al, (2019), mBio, 10

Detection in the United Kingdom of the Neisseria gonorrhoeae FC428 clone, with ceftriaxone resistance and intermediate resistance to azithromycin, October to December 2018.

Eyre DW. et al, (2019), Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin, 24

Candida auris in an Intensive Care Setting. Reply.

Eyre DW. et al, (2019), The New England journal of medicine, 380

Genetic relatedness of ceftriaxone-resistant and high-level azithromycin resistant Neisseria gonorrhoeae cases, United Kingdom and Australia, February to April 2018.

Jennison AV. et al, (2019), Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin, 24

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