Learning patterns of HIV-1 resistance to broadly neutralizing antibodies with reduced subtype bias using multi-task learning.
Igiraneza AB. et al, (2024), PLoS Comput Biol, 20
Drivers of epidemic dynamics in real time from daily digital COVID-19 measurements.
Kendall M. et al, (2024), Science (New York, N.Y.)
Estimating the contribution of setting-specific contacts to SARS-CoV-2 transmission using digital contact tracing data.
Wang Z. et al, (2024), Nature communications, 15
Prevalence of persistent SARS-CoV-2 in a large community surveillance study.
Ghafari M. et al, (2024), Nature
Digital measurement of SARS-CoV-2 transmission risk from 7 million contacts.
Ferretti L. et al, (2024), Nature, 626, 145 - 150
Demographics of sources of HIV-1 transmission in Zambia: a molecular epidemiology analysis in the HPTN 071 PopART study.
Hall M. et al, (2023), Lancet Microbe
Longitudinal population-level HIV epidemiologic and genomic surveillance highlights growing gender disparity of HIV transmission in Uganda.
Monod M. et al, (2023), Nature microbiology
Lineage replacement and evolution captured by 3 years of the United Kingdom Coronavirus (COVID-19) Infection Survey.
Lythgoe KA. et al, (2023), Proceedings. Biological sciences, 290
Reply to Ekström and Ottersen: Real-time access to data during outbreaks is a key to avoid a local epidemic becoming a global pandemic.
Stenseth NC. et al, (2023), Proceedings of the National Academy of Sciences of the United States of America, 120
Limited emergence of resistance to integrase strand transfer inhibitors (INSTIs) in ART-experienced participants failing dolutegravir-based antiretroviral therapy: a cross-sectional analysis of a Northeast Nigerian cohort.
Abdullahi A. et al, (2023), The Journal of antimicrobial chemotherapy, 78, 2000 - 2007
Genomic assessment of invasion dynamics of SARS-CoV-2 Omicron BA.1.
Tsui JL-H. et al, (2023), Science (New York, N.Y.), 381, 336 - 343
Uptake of medical male circumcision with household-based testing, and the association of traditional male circumcision and HIV infection.
Zewdie K. et al, (2023), AIDS (London, England), 37, 795 - 802
Frequency matters: comparison of drug resistance mutation detection by Sanger and next-generation sequencing in HIV-1.
Balakrishna S. et al, (2023), The Journal of antimicrobial chemotherapy, 78, 656 - 664
How to avoid a local epidemic becoming a global pandemic.
Stenseth NC. et al, (2023), Proceedings of the National Academy of Sciences of the United States of America, 120