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A highly virulent variant of HIV-1 circulating in the Netherlands.

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Wymant C. et al, (2022), Science (New York, N.Y.), 375, 540 - 545

The epidemiological impact of the NHS COVID-19 app.

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Time to evaluate COVID-19 contact-tracing apps.

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Epidemiological changes on the Isle of Wight after the launch of the NHS Test and Trace programme: a preliminary analysis.

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A Comprehensive Genomics Solution for HIV Surveillance and Clinical Monitoring in Low-Income Settings.

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Quantifying SARS-CoV-2 transmission suggests epidemic control with digital contact tracing.

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Ferretti L. et al, (2020), Science (New York, N.Y.)

Evaluation of phylogenetic methods for inferring the direction of HIV transmission: HPTN 052.

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Zhang Y. et al, (2020), Clinical infectious diseases : an official publication of the Infectious Diseases Society of America

The evolution of subtype B HIV-1 tat in the Netherlands during 1985-2012.

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Workup of Human Blood Samples for Deep Sequencing of HIV-1 Genomes.


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PHYLOSCANNER: Inferring Transmission from Within- and Between-Host Pathogen Genetic Diversity.

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Wymant C. et al, (2017), Molecular biology and evolution

Horizontal DNA Transfer Mechanisms of Bacteria as Weapons of Intragenomic Conflict.

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