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Draft Genome Sequences of 64 Type Strains of 50 Species and 25 Subspecies of the Genus Staphylococcus Rosenbach 1884.

Journal article

Cole K. et al, (2019), Microbiology resource announcements, 8

Reply to Held: When is a harmonic mean p-value a Bayes factor?

Journal article

Wilson DJ., (2019), Proceedings of the National Academy of Sciences of the United States of America, 116, 5857 - 5858

DeepAMR for predicting co-occurrent resistance of Mycobacterium tuberculosis.

Journal article

Walker TM. et al, (2019), Bioinformatics (Oxford, England)

GenomegaMap: within-species genome-wide dN/dS estimation from over 10,000 genomes

Other

Wilson D. and The CRyPTIC Consortium None., (2019)

The harmonic mean p-value for combining dependent tests.

Journal article

Wilson DJ., (2019), Proceedings of the National Academy of Sciences of the United States of America, 116, 1195 - 1200

Bayesian inference of ancestral dates on bacterial phylogenetic trees.

Journal article

Didelot X. et al, (2018), Nucleic acids research, 46

Application of machine learning techniques to tuberculosis drug resistance analysis.

Journal article

Kouchaki S. et al, (2018), Bioinformatics (Oxford, England)

Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing.

Journal article

CRyPTIC Consortium and the 100,000 Genomes Project None. et al, (2018), The New England journal of medicine, 379, 1403 - 1415

The distribution of bacterial doubling times in the wild.

Journal article

Gibson B. et al, (2018), Proceedings. Biological sciences, 285

Machine learning for classifying tuberculosis drug-resistance from DNA sequencing data.

Journal article

Yang Y. et al, (2018), Bioinformatics (Oxford, England), 34, 1666 - 1671

Bayesian reconstruction of transmission within outbreaks using genomic variants.

Journal article

De Maio N. et al, (2018), PLoS computational biology, 14

Severe infections emerge from commensal bacteria by adaptive evolution.

Journal article

Young BC. et al, (2017), eLife, 6

The Distribution of Bacterial Doubling Times in the Wild

Journal article

Gibson B. et al, (2017)

Promiscuous bacteria have staying power.

Journal article

Massey RC. and Wilson DJ., (2017), eLife, 6

The harmonic mean p-value for combining dependent tests

Journal article

Wilson DJ., (2017)

Whole-Genome Sequencing Reveals the Contribution of Long-Term Carriers in Staphylococcus aureus Outbreak Investigation.

Journal article

Gordon NC. et al, (2017), Journal of clinical microbiology, 55, 2188 - 2197

The Bacterial Sequential Markov Coalescent.

Journal article

De Maio N. and Wilson DJ., (2017), Genetics, 206, 333 - 343

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