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Publications

Effects of control interventions on Clostridium difficile infection in England: an observational study.

Dingle KE. et al, (2017), The Lancet. Infectious diseases, 17, 411 - 421

Epidemiology of Clostridium difficile in infants in Oxfordshire, UK: Risk factors for colonization and carriage, and genetic overlap with regional C. difficile infection strains.

Stoesser N. et al, (2017), PloS one, 12

Mutational signatures in esophageal adenocarcinoma define etiologically distinct subgroups with therapeutic relevance.

Secrier M. et al, (2016), Nature genetics, 48, 1131 - 1141

Increasing burden of community-acquired pneumonia leading to hospitalisation, 1998-2014.

Quan TP. et al, (2016), Thorax, 71, 535 - 542

Capsular Typing Method for Streptococcus agalactiae Using Whole-Genome Sequence Data.

Sheppard AE. et al, (2016), Journal of clinical microbiology, 54, 1388 - 1390

Rapid, comprehensive, and affordable mycobacterial diagnosis with whole-genome sequencing: a prospective study.

Pankhurst LJ. et al, (2016), The Lancet. Respiratory medicine, 4, 49 - 58

Domain specific modelling for clinical research

Davies J. et al, (2015), DSM 2015 - Proceedings of the Workshop on Domain-Specific Modeling, 1 - 8

Whole-genome sequencing for prediction of Mycobacterium tuberculosis drug susceptibility and resistance: a retrospective cohort study.

Walker TM. et al, (2015), The Lancet. Infectious diseases, 15, 1193 - 1202

Whole-genome sequencing provides new insights into the clonal architecture of Barrett's esophagus and esophageal adenocarcinoma.

Ross-Innes CS. et al, (2015), Nature genetics, 47, 1038 - 1046

Role of data warehousing in healthcare epidemiology.

Wyllie D. and Davies J., (2015), The Journal of hospital infection, 89, 267 - 270

Formal model-driven engineering of critical information systems

Davies J. et al, (2015), Science of Computer Programming, 103, 88 - 113

Role of data warehousing in healthcare epidemiology

Wyllie D. and Davies J., (2015), Journal of Hospital Infection, 89, 267 - 270

Ordering of mutations in preinvasive disease stages of esophageal carcinogenesis.

Weaver JMJ. et al, (2014), Nature genetics, 46, 837 - 843

A formal model for RDF dataset constraints

Solbrig H. et al, (2014), Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 8388 LNCS, 244 - 260

Introduction to the electronic government education mini-track

Estevez E. et al, (2014), Proceedings of the Annual Hawaii International Conference on System Sciences

Visual compression of workflow visualizations with automated detection of macro motifs.

Maguire E. et al, (2013), IEEE transactions on visualization and computer graphics, 19, 2576 - 2585

Data-driven Markov models and their application in the evaluation of adverse events in radiotherapy.

Abler D. et al, (2013), Journal of radiation research, 54 Suppl 1, i49 - i55

Hadron therapy information sharing prototype.

Roman FL. et al, (2013), Journal of radiation research, 54 Suppl 1, i56 - i60

THE CANCER RESEARCH UK (CRUK) FUNDED ICGC OESOPHAGEAL ADENOCARCINOMA PROJECT: MRC RESEARCH CENTRE AND CRUK CAMBRIDGE RESEARCH INSTITUTE

Weaver JMJ. et al, (2013), GUT, 62, A29 - A29

A metadata-aware application for remote scoring and exchange of tissue microarray images.

Morris L. et al, (2013), BMC bioinformatics, 14

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