Cookies on this website
We use cookies to ensure that we give you the best experience on our website. If you click 'Continue' we'll assume that you are happy to receive all cookies and you won't see this message again. Click 'Find out more' for information on how to change your cookie settings.

High throughput sequencing technologies generate large amounts of short reads. Mapping these to a reference sequence consumes large amounts of processing time and memory, and read mapping errors can lead to noisy or incorrect alignments. SNP-o-matic is a fast, memory-efficient and stringent read mapping tool offering a variety of analytical output functions, with an emphasis on genotyping.http://snpomatic.sourceforge.net.

Original publication

DOI

10.1093/bioinformatics/btp403

Type

Journal article

Journal

Bioinformatics (Oxford, England)

Publication Date

09/2009

Volume

25

Pages

2434 - 2435

Addresses

Wellcome Trust Sanger Institute, Hinxton, Cambridge, UK. mm6@sanger.ac.uk

Keywords

Computational Biology, Polymorphism, Single Nucleotide, Algorithms, Internet, Software